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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015914711.1_cds_XP_016464672.1_57692
CDS Infomation

[gene=LOC107787593] [db_xref=GeneID:107787593] [protein=probable beta-1,4-xylosyltransferase IRX9H] [protein_id=XP_016464672.1] [location=complement(join(21672..21842,21952..22201,25537..26279))] [gbkey=CDS]
Sequence

ATGGCTTCCATCCGAAGAACTCTATCACCGAATCACGAACGGCATTATCAGAATGGAAAC
CAAACTTCAGTTCAATCGCCATCTCAGAAGCTCATTTTAAACGGCAAAAGCTCTTCGATA
CTATATTCTCGGAAAAATTATATATCCAGGAGGAAGTTATTCTATAGGTGTTTGATATTT
TTTGTGCTAGGGTTTATATTAGGTATGGCACCATTTGGTGATTTTGATGATGCGAGGAGC
CGTGATTTTTCATTTGAGATCAAGCCGTCTGTAGTGAATGTTAAGGAGGAGATGAAAGAT
GAGGTAATCCCTAGACCTGATAATGTTGTGGTAAACTCAGTTAAATTACCTGGTAGTTTG
GTGGACGAAGTGAAAGGGAAGTTTGATTATGTACCGAGGAAACTGTTGATTGTGGTGACT
CCGACTTATAATAGGGCACTTCAAGCTTACTATCTCAATAGATTGAGCGAGGTGTTGAAG
ACCGTGAAGTCACCTCTGTTGTGGATTGTGGTTGAAATGAATGCAGCATCTGCTGAGACT
GCAGATATTTTGAGGAAGACTGGAGTTATGTACCGGCATCTAGTGTGTTCCAAGAATATG
ACGGATATAAAAGACCGCGGGGTGCATCAGAGGAATGTTGCTTTGGATCATATTGAACAT
CATAGGCTCGATGGAATTGTTTACTTTGCAGATGATGATAATATCTACTCCCTTGAATTG
TTTGAGAGCATTAGATCGATCAATCGTTTTGGCACTTGGCCTGTTGCTATGCTGGCGCAA
AGTAAAAGCAAAGCAATACTAGAGGGCCCTGTGTGTAATGGAAGTCAAGTTATTGGGTGG
CACACTAATGAGAAGAGTAAGCAACTTAGAAGATTCCACGTCGATATGTCTGGCTTTGCC
TTCAATAGCACTATATTATGGGATCCAAAGAAATGGCATCGACCAACTTCAGATCCCATT
CGACAGTTGGACAATGTGAAGGAGGGTTTCCAAGAAACCACTTTCATAGAACAAATTGTT
GAAGACGAAAGCCAAATGGAAGGTATCCCCCCTGGTTGCTCAAGGGTATTGAATTGGCAC
CTTCATCTGGAAACTCATGGACTTGTCTATCCGAGAGGCTGGCTCCTTCAAAAGAACCTT
GATGCAGTTTTCTCTACCACATGA

Peptide Sequence

PEP ID

XP_016464672.1
PEP Infomation

PREDICTED: probable beta-1,4-xylosyltransferase IRX9H [Nicotiana tabacum]
Sequence

MASIRRTLSPNHERHYQNGNQTSVQSPSQKLILNGKSSSILYSRKNYISRRKLFYRCLIF
FVLGFILGMAPFGDFDDARSRDFSFEIKPSVVNVKEEMKDEVIPRPDNVVVNSVKLPGSL
VDEVKGKFDYVPRKLLIVVTPTYNRALQAYYLNRLSEVLKTVKSPLLWIVVEMNAASAET
ADILRKTGVMYRHLVCSKNMTDIKDRGVHQRNVALDHIEHHRLDGIVYFADDDNIYSLEL
FESIRSINRFGTWPVAMLAQSKSKAILEGPVCNGSQVIGWHTNEKSKQLRRFHVDMSGFA
FNSTILWDPKKWHRPTSDPIRQLDNVKEGFQETTFIEQIVEDESQMEGIPPGCSRVLNWH
LHLETHGLVYPRGWLLQKNLDAVFSTT

Transcript Sequence

Gene sequence data has not been registered.